The KNOTTIN database

knottin card: 1dkc

  General data Collier de Perles
PDB ID
1dkc   Chain: A   Length: 38 
Downloads
Renumbered            PDB file
Renumbered and fitted PDB file
Nomenclature (6)8.0(3)10
FamilyPlant antimicrobial
Descriptor PAFP-, ANTIFUNGAL PEPTIDE
Experimental SOLUTION NMR Resolution: NOT APPLI BMRB
Source PHYTOLACCA AMERICANA
Function Antifungal
Publication D.C.WANG et al. 1999
Links
 SwissProt // PDB // PDBsum // MMDB // PubMed 



  Sequence and Structure help
Number 18 19 20 21 22 23   37 38 39 40 41 42 43 44   56 57 58 59 60 61 62   78 79 80 81 82 83 84 85   95 96 97 98 99 100 101 102 103
Residue A G C I K N   G G R C N A S A   G P P Y C C S   S Y C F Q I A G   Q S Y G V C K N R
Secondary C C C T T T   T E E E T T T T   T T C C T T T   T E E E E E T T   T T E E E E E C C
Phi 360 -69 -155 -128 -77 -91   125 -99 -108 -142 -146 -76 -93 -122   84 -67 -75 -169 -91 -75 -123   71 -105 -152 -102 -125 -120 -87 -162   -111 67 -137 -129 -117 -88 -151 -76 -151
Psi -175 164 174 125 -51 61   61 156 131 173 99 -11 -15 38   78 110 -78 138 -178 -32 27   -4 148 117 109 149 164 91 -69   5 58 136 151 136 152 -173 -167 360
ASA 121 75 65 96 90 131   45 5 154 9 28 60 67 76   56 79 100 124 18 23 21   78 79 45 111 46 76 113 63   154 52 88 0 64 2 72 71 188
PAC 85 100 39 64 45 80   100 0 72 7 25 66 28 73   100 63 90 59 5 9 17   64 45 33 66 12 49 100 100   82 46 53 0 67 4 55 46 61